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Viromics approaches for the study of viral diversity and ecology in microbiomes
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The JGI announces 2024 awardees for our Community Science Program annual call
… “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, who heads JGI’s … and I look forward to seeing their outcomes.” The annual CSP call is focused on large-scale genomic science projects … here on our website . See below for the full list of 2024 CSP Annual Call awardees. …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … variation in haloarchaea, they also characterized metagenomes (collections of partial genomes) from six … has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Sciences. 2021 May 4;118(18). https://doi.org/10.1073/pnas.2019855118 McGivern BB et al. Decrypting bacterial … Wang G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic …
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User Support Analysis Group
… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …
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Alabama Agricultural & Mechanical University Internship Program
… Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… of the innovative research  being proposed by this year’s CSP investigators,” said Tanja Woyke, Deputy Director of … including one previous New Investigator awardee.  The CSP Annual call is focused on large-scale genomic science … here on our website.   See below for the full list of 2025 CSP Annual Call awardees. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the …
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A Plant Root Atlas for Tracking Developmental Trajectories
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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