Results

Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Fungus Fuels Tree Growth
Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural changes in … 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science Foundation …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
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Finding the Fermenters
… browser that allows other researchers to study the genomes and predict the metabolic abilities of these … interactive browser – contains the phenotypic records of 8,350 organisms along with 4,355 genomes and 13.6 million … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of …
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User Support
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that … they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories …
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Emiley Eloe-Fadrosh
… detection of microbial diversity. Nature Microbiol. 1: 15032. Eloe-Fadrosh EA, et al. 2016. Global metagenomic … 2003 Board Member, Genomic Standards Consortium (2018-current) Steering Committee Member, International … Adjunct Graduate Faculty Member, Duke University (2018-2020) Section Head, Microbial Evolution & Genomics, …
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Better Genome Editing for Bioenergy
… work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA and JW …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … Paez-Espino  discussed an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. … . The comparative framework provided by these high quality reference genome sequences could help researchers better … S.Z., from the National Science Foundation to J.M.N. (NSF 1501826), from the Japan Society for the Promotion of Science …
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