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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to … their functional roles in their community. This study shows how the function-driven, single-cell screen can uncover … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial … land plants, which means they offer a lot of insights into how plant materials can be broken down for things like …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass … an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, etc. — to its …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … species to answer questions about how they break down plant materials, which could be useful for industrial …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … use Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz …
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