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Hi-C metagenome sequencing reveals soil phage–host interactions
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Genome Sequence of the Dioxin-Mineralizing Bacterium Sphingomonas wittichii RW1 ▿
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Complete Genome Sequence of an Evolved Thermotoga maritima Isolate
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … called Chlamydomonas reinhardtii. We’re using an attentive deep learning model called Tabnet in order to perform …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 … the lab relegated the experimental scientist to library research for three months. While reading up on photosynthesis, …
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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data …
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96
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Complete Genome Sequence of the Haloalkaliphilic, Hydrogen-Producing Bacterium Halanaerobium hydrogeniformans
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Complete genome sequence of Arthrobacter sp. strain FB24
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