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From Competition to Cooperation
… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … allow host plants, such as candidate  bioenergy feedstock crops, to acquire nutrients. Additionally, these results … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …
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Taking Stock of the Known and Unknown Microbial Space
… genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” The study, …
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome … metagenomes can I submit?  How deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), … count toward the 1Tb cap. PacBio metagenomes are currently sequenced without pooling, which yields ~ 180 Gb of data per …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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JGI announces first round of 2023 New Investigator awardees
… our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — …
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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? … or PhycoCosm. At the moment there is no DOE mandate to sequence more Amoebozoa, but we are open to a dialogue about …
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MGM Workshop at Fisabio Summer School 2026
… research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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