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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… CSP call , and the results are described in ACS Chemical Biology. Using fluorescent biosensors to monitor the …
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JGI@25: Strengthening Soybean
… rotation, but soybean ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s … grow discolored and rust pustules develop as the pathogen feeds on its soybean host, which is maintained alive. Once a …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… bacterium itself was discovered by Olivier Gros, a marine biology professor at the Université des Antilles in … Silvina Gonzalez-Rizzo, an associate professor of molecular biology at the Université des Antilles and a co-first author …
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Game On: High School Students Drive Everglades Metagenomics Study
… Advanced International Certificate of Education (AICE) Biology class at Florida’s Boca Raton Community High School. … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the …
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Georg Rath
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
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JGI Scientists Pen Genome Watch Articles
… made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene …
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JGI@25: The Little Alga That Could
… co-led by Daniel Rokhsar, head of the JGI’s Computational Biology Program, along with JGI Computational Scientist …
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SPRUCE-ing Up Science
… brings a bioinformatics expertise, a combination of biology and computer science, to reveal clues about how … to develop and expand into the world of evolutionary biology. And around that time, a collaborative internship … to explain the results. Based on the type of questions and feedback from his JGI audiences, he began to understand what …
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Gut Fungi: Unexpected Source of Novel Chemicals
… author Candice Swift — verified that the fungi expressed biosynthetic gene clusters, which are “building blocks” of … project was supported by a grant from Santa Barbara Cottage Hospital and the University of California, Santa …
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Building Sphagnum Genomic Resources
… and the University of Vienna  reported recovering draft metagenome-assembled genomes for seven novel species of …
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Learning to Look
… these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of … use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 …
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