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An Earth Month Look at Sustainability Efforts at the JGI
… level as part of the JGI MicroScale Applications team. But on a recent lunch break, she got to help tackle a …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… and are of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, … methane, those are already diametrically opposite — but also you do not even know if they’re actually being used … were able to identify the potential for methanogenesis, but questions remained as to if these microorganisms were …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… of viruses that infect not just crops, animals and humans, but also microbes whose presence or absence can impact the … Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses infect microbes all … effective in achieving higher quality results compared to smaller individual efforts. This is also the type of …
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A More Intuitive Phytozome Interface
… staffing constraints. We hope to add several of them soon, but don’t yet have a timeline for their restoration. They …
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Building Wet and Dry Lab Skills
… I was working on was very difficult. I had a lot of errors, but I'm still working through those. And it's the confidence …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
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Scaling Up Existing Skill Sets
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… that the intent is not to remove all the bay laurels, but only ones in close association with the oaks. Another …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… and applying them to environmental and energy challenges. But not all scientists have the expertise and resources to … for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities that push …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… And at their base are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is … the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary across the global ocean. Phytoplankton … or algae, form the basis of productive food webs in cold, but fecund polar waters. “A lot of our food comes from the …
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A Collaboration to Improve Plant Genome Annotations Across Species
… PPRD could help with understanding gene functional roles, but the experimental inconsistency makes interpretation and … in 2020, seven more groups joined the project to contribute to the data for six new species. I must mention that some of the members from the initial team contributed additional sample sets, such as sorghum internode time …
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DAP-seq Drives Robust Mapping of Gene Regulation
… are very, very stable over long evolutionary times. But, there’s a lot of action happening in terms of where … is available to JGI users for studies on organisms with smaller genomes, such as bacteria and certain fungi. Scaling … identify the most critical regulatory elements that contribute to plant resilience and adaptability. By analyzing data …
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