Search

… this time aligning it with over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis … improve the genome’s accuracy, and increase its length by 29.5 Megabasepairs. 2017: Pan-genome analysis of sorghum … understand what genes exist across the species. Earlier pan-genomes for other plants, like the soybean relative Glycine …

Line Between Plasmids and Phages … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria … Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …

… warmer waters, including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). … Communications , warmer waters and communities dominated by prokaryotes could replace those of eukaryotes much more … on the study — a collaboration of eight institutions led by UEA and including the U.S. Department of Energy (DOE) …

Microbial Genomics Program since 2009 and heads the Single Cells group. She has also served as the Functional Genomics … genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … am thrilled to see Dr. Woyke’s important work acknowledged by this most prestigious honor,” said Axel Visel , JGI …

… a novel approach to better understand microbial communities by looking at protein function within them. The work was led … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … has been no real analysis of protein families from metagenomes per se.”  Recently, other research teams have …

… are everywhere — in soil, the sea and, of course, the cells of other organisms. As they infect microbes like … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … That study multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its …

… in solving DOE’s most challenging problems. … PhD Cell Biology. Duke University MS Developmental Biology, …

… technologies have led to an abundance of microbial genomes becoming available to the global research … a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually … of the available datasets. Efforts to recover MAGs by extracting data directly from environmental samples over …

… sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies … it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows … could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the main source of …

The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The …

… computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. …