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Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
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iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
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Soil pH influences the structure of virus communities at local and global scales
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Insights into the dynamics between viruses and their hosts in a hot spring microbial mat
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Identification of over ten thousand candidate structured RNAs in viruses and phages
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Jane Grimwood Named HudsonAlpha Genomics Chair
… was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the Center staff that moved to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … and are exploring improvements to switchgrass through more targeted genome editing techniques. A 2020 Nature …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my first publication and it feels so rewarding,” Wint said. For Axel … internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, …
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Olpidium, The Key to the Origin of Terrestrial Fungi
Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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