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… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The … Filamentous fungi are like handymen who show up at a job site for a task that requires a flathead screwdriver with a … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently …

… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal …

… genes with other organisms (a third of those shared by both humans and flowering plants). Its genome also contains … JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …

… to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in … done by the Banfield lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, Calif., and …

… bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … pipeline  that reveals in situ functional activities of specific microbial groups within complex communities.  The …

… joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational … towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …