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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … (JGI), presented on generating vector representations of proteins in order to conduct more efficient protein sequence …
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Mediation of plant–mycorrhizal interaction by a lectin receptor-like kinase
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Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and …
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Escalation in the host-pathogen arms race: A host resistance response corresponds to a heightened bacterial virulence response
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the …
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Aquifer environment selects for microbial species cohorts in sediment and groundwater
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A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses
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Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments
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Adaptations to Submarine Hydrothermal Environments Exemplified by the Genome of Nautilia profundicola
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Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment
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Fungal diversity and function in metagenomes sequenced from extreme environments
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