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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Functional Characterization of Two Class II Diterpene Synthases Indicates Additional Specialized Diterpenoid Pathways in Maize (Zea mays)
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake … a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak … has another supercomputer, Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also …
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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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Doubling Down on Known Protein Families
… — worse, they didn’t even know how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to better understand … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… is a refined capability that is desirable in the microbiome field due to its high recovery of single-cell genomes. This … JGI as a leader in single-cell genomic amplification at a large scale. Summary The two most common methods for collecting … U.S. Department of Energy Joint Genome Institute (https:// …
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Microbes and Climate Change: a Research Prospectus for the Future
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Gone with a trace: cataloguing the disappearing gut microbes
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A detailed gene expression study of the Miscanthusgenus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes
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The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies
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