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Triggering Morel Fruiting
… litter and to incorporate the assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying … layer above forest soils, but the nutritional association between mycorrhizal fungi and tree roots as well. This might be one of the key physiological …
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Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages
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Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress
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A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains.
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Membrane lipid and expression responses of Saccharolobus islandicus REY15A to acid and cold stress
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Team Science Reveals Important Protein in Poplar
… the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy (DOE) Joint Genome … The trees can be bred to be more resistant to environmental stresses such as nutrient-poor land, drought and disease.  … resistant to disease compared to the controls.  Analyses to understand how the protein influences poplar responses to …
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Insights into the dynamics between viruses and their hosts in a hot spring microbial mat
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Genetic isolation between two recently diverged populations of a symbiotic fungus
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Introducing New Members of the JGI User Executive Committee
… activity-based cell sorting pipelines to further the link between cellular phenotypes and genotypes. Pawlowska, who … U’Ren, who studies ecological and evolutionary factors shaping the assembly of fungal endophytes across land plants and lichens, mentioned her interest in guiding JGI …
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Frederik Schulz
… machine learning to find novel functions that may impact microbiome structure and biogeochemical cycles. He provides … Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 … mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Roux …
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Nikos Kyrpides
… National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel … Schulz F, et al. 2020. Giant virus diversity and host interactions through global metagenomics. Nature . … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …
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Party in the Rhizosphere
… There’s a party in the soil, and microbes are the VIPs. They’re feasting on the compounds that plants secrete through their roots, creating a lively zone called the rhizosphere. In …
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