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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … but it also requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … It plays an important role in regulating microbial cellulose production and biofilm formation, which affects a …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … proteins. PhycoCosm’s built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows …
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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, land plant evolution. … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office …
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