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The first two chromosome‐scale genome assemblies of American hazelnut enable comparative genomic analysis of the genus Corylus
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … life.  These led to highly detailed assemblies for three strains of  Zygnema circumcarinatum . Published  May …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … Program . The comparative framework provided by these high quality reference genome sequences could help researchers better …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … Notable examples include CheckV , which assesses the quality and completeness of metagenome-assembled viral …
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites
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Construction of lactic acid overproducing Clostridium thermocellum through enhancement of lactate dehydrogenase expression
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Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs
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2024 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … only the chance to speak to our accomplishments of the last three years but to discuss the future activities of the JGI. …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … Laboratory (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using … at these gardens. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs)—the  Great Lakes …
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