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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy Schmutz , head of … means most genes are found as multiple copies across the chromosomes. “In the past, we needed model systems to test … a decade ago. As sequencing technologies have advanced, assembly and annotation of the genome sequence has improved …
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Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Genome sequence of Nitrosopumilus adriaticus CCS1 assembled from an ammonia-oxidizing enrichment culture
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Old can be new again: HAPPY whole genome sequencing, mapping and assembly
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss … sites. There was slight congruity between all the sites.  Shotgun metagenomic analysis discovered the presence of … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Forming Scientific Connections and Building Community
… of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced through their … Project: “ Investigating metabolic network of symbiosis using genome-scale metabolic models ” Pedro Antonio Perez Ferrer : “I …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants … of essential genes in metabolic networks that were missed using traditional approaches. This novel form of …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … bacterial and archaeal genome sequences have been generated using techniques that the JGI has pioneered, including … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies
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Functional Metagenomics of Spacecraft Assembly Cleanrooms: Presence of Virulence Factors Associated with Human Pathogens
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