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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The … known to be partially due to the DNA sequence that makes up an individual’s genome. The genes of sorghum plants are … evaporation in the leaves. Each week the team would set up a makeshift lab powered by a generator at the KARE field …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … and biofuels . This first report of their work, supported through the Emerging Technologies Opportunity … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. Registration for … Archaea and Eukarya.   One genome, two metabolic pathways “Up to this point, most phylogenomic trees have relied on …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of …
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MycoCosm Tutorial
… equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor …
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Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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The first two chromosome‐scale genome assemblies of American hazelnut enable comparative genomic analysis of the genus Corylus
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The amphioxus genome and the evolution of the chordate karyotype
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