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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high … working to address some of the most pressing challenges of our time. For more information, please visit  …
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iPHoP: A Matchmaker for Phages and their Hosts
… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … described in Plos Biology , the research team led by scientists at the U.S. Department of Energy Joint Genome … it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality …
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Biotech Partners
… to step outside their boundaries and dream big. They encourage students to pursue personal, academic, and … by various biotech and healthcare industry partners. Our interns say their experiences allowed them to:  Learn …
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Picking Up Threads of Cotton Genomics
… underscores its value and importance in the fabric of our lives. In the United States, cotton production centers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … working to address some of the most pressing challenges of our time. For more information, please visit  …
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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine … Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science …
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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for … team. The work was a joint effort led by scientists at the Center for Advanced Bioenergy and … to novel traits. M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …
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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 … They play key roles in global carbon cycling, are sources of natural products, and have potential as biofuel …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education … Faculty interested in developing proposals with JGI and Biosciences Area researchers should contact David Gilbert …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE …
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Network Modeling of Complex Data Sets
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