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… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … within their rumen. There is another climate-minded reason for studying rumen: Livestock live off plant matter, and … different areas, beyond the project’s initial scope. Sequencing and culturing this vast collection of rumen …

The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial … enzyme activity assay. The work was  reported in  The ISME Journal . While the screen caught several microbes from known …

The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The … on the effective management and strategic objectives for the JGI’s data science, informatics and information … panel for the JGI’s Director, CIO, and Deputies. The IAC does not perform management functions, nor does it direct …

Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …

… sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … working to address some of the most pressing challenges of our time. For more information, please visit  …

… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan …

… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … also carries out custom preparative work for difficult user projects, including those that require fluorescence … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … a Genome Insider podcast minisode.) Since the JGI’s early sequencing of C. reinhardtii became available, data mined by … new Chlamydomonas genome-related Community Science Program projects of all kinds,” noted Igor Grigoriev, head of the …

… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab …

WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge …

This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …