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Improving the Cacao Genome and Phytozome
… for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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A One-Stop Shop for Analyzing Algal Genomes
… sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input … feedback and make recommendations on how the JGI Science Programs can best support the user community. Advise the JGI …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … superphylum of extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most … not free-living archaea but rather symbionts. Cavicchioli’s graduate student, Joshua Hamm, successfully cultured two …
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Behind the Paper: Hot Springs Metagenomics
… Adapting the graduate research experience amidst a global pandemic   …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … Natalia Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … and process the samples starting at 10am Pacific time. JGI researchers helped develop the overall experimental …
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2025 NeLLi Symposium
… genomic coverage. Experts in cultivation and environmental genomics will work together to develop recommendations for … Schulz , New Lineages of Life Lead Tanja Woyke , Microbial Program Gitta Szabo , User Project Coordination Rekha … JGI Organizers …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study elaborated on …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Genome Initiative in 2018 as part of its Community Science Program. The OGG has set out to generate high-quality genome … ( Learn more about OGG in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after …
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A Complex Confection Decoded: Sugarcane Reference Genome
… The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of …
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