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An Enzyme System to Help Catalyze Bioproduction of Plastic
… bacteria to produce ethylene and more.  Microbes excel at recycling the abundant miscellanea of their surroundings. … ocean simply signals we’re near the beach. For bacteria, that salty, slightly stinky air is a rich source of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … networks can serve as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science … on predicting the level of photosynthesis in a model green alga called Chlamydomonas reinhardtii. We’re using an …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and … to convert food into energy. However, in environments with little or no oxygen, life had found other ways to produce … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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What Happens To a Rainforest When You Dial Up Drought?
… on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at what …
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CSP Functional Genomics
… Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial … conducted by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater … Biological and Environmental Research (BER) missions. The JGI provides integrated high-throughput sequencing and …
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . … metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and produce antibiotics. Still, the team estimates that genomic information is only available for a fraction of …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, …
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … . JW acknowledges additional support from the National Science Foundation Graduate Research Fellowship …
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