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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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The Marchantia polymorpha pangenome reveals ancient mechanisms of plant adaptation to the environment
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High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6T), a diphenol degrader with genes involved in the catechol pathway
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Computationally Classifying Fungal Lifestyles
… researchers developed an algorithm that “taught” a computer how to classify 101 representative genomes of … nutrients from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the ecology …
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Igor Grigoriev
… Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program … Nat Biotechnol. 2011; 29: 922-927. Eastwood DC et al. The plant cell wall-decomposing machinery underlies the …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … learn more about conifer needle microbiomes. The survey showed what these microbes are equipped to do on the leaf … a leaf’s life. Additionally, the phyllosphere microbes can degrade and transform plant-emitted volatile organic …
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Better Living Through Bioenergy
… addiction to fossil fuels. In this episode, we peek into how scientists Aindrila Mukhopadhyay and Steve Singer are … the versatile bacterium Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the Advanced Photon … and the use of laboratory resources. Capacity for the plant growth chamber is limited so that will have to be … something that any of the user facilities would cover. Q6: How can I maximize my chance for success? A: Reach out ahead …
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High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7T, and emended description of the genus Halotalea
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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