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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science … search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 … ribosomal RNA sequences. The next step applied metagenomic binning (grouping sequencing reads by their likely …
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Leo Baumgart
… biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … team responsible for piloting and operationalizing new genomic technologies, integrating automated liquid handling … plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data … at the same time, take advantage of what we can do now with genomics to really make inroads into plant biology and …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
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Four principles to establish a universal virus taxonomy
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Microbial Genomics & Metagenomics (MGM) Workshop
… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …
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A Sorghum Pangenome Opens More Doors to Discovery
… and thousands of resequenced sorghum varieties, a resource for breeders and researchers to harness the traits that let … keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … fields, understanding this plant eventually offers avenues for translating its strengths into other crops for biofuels …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department … Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional …
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Corals in Hot Water Get Help From Their Microbes
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Better Crops With a Pointillist Approach to Plant Genomics
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … Neutron Scattering (BioSANS) instrument at the Center for Structural Molecular Biology (CSMB) at Oak Ridge …
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JGI@25: Strengthening Soybean
… ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … up with him recently. “So, there’s going to be a need for these biofuels and that’s a good niche market for soybean.”  Upon its initial release in 2009, the soybean …
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