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Microbial Genomics & Metagenomics (MGM) Workshop
… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This … familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence …
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… and applying laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of …
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A unified initiative to harness Earth's microbiomes
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Terabase-Scale Coassembly of a Tropical Soil Microbiome
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … capture the vast nature of fungal diversity. Examining databases like MycoCosm , the JGI’s online fungal genomics … With roughly half of all fungal genes still lacking functional annotations, the challenge to applying AI is …
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Association of functionally significant Melanocortin-4 but not Melanocortin-3 receptor mutations with severe adult obesity in a large North American case–control study
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … various bioinformatic tools and comprehensive curated databases, including nomenclatural and genomic information …
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Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax paradoxus Strain EPS
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Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
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