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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. The planet’s … Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how …
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DAP-seq Drives Robust Mapping of Gene Regulation
… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like … an important functional role in regulating gene expression. Focusing on these conserved sites, researchers can hone in … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … Products meeting earlier this year. And today we have our conversation with Professor Alison Narayan, from the … In this episode, Dan and Jackie talk to Alison Narayan , from the University of Michigan’s Life Sciences …
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VEGA Symposium
…   Register here  Registration fees:  Early Bird rates available now General & Berkeley … Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place November 18-19, 2026 on the UC Berkeley campus. Organized every two years since …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … for metagenomic sequencing. A study  recently published in  Microbiome shows that the way nutrients flow through the … Antarctic Science program (project 4031). The work conducted by the US Department of Energy Joint Genome …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) …
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How to Target a Microbial Needle within a Community Haystack
… make-up of specific uncultivated microbes from complex environmental samples. The Science A team led by researchers at … targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and associate … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer of marine …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an … On this bonus episode of Natural Prodcast, it’s the Self Promotion …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen (UDE), Germany with … are excited to continue our fruitful collaboration in the microbiome space that has resulted in many impactful papers …
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