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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used … Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from the lab to the …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … dominated Copper River Delta. They’re looking at how the microbes in these high latitude wetlands, such as the Copper … interact with their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly … episodes, we’ve covered the specialized software and supercomputers behind this project. But every part of this project depends on lakewater …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … habits of Mucoromycota fungi, and their effects on these oil-producing species. Many fungi have beneficial symbiotic … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  … Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: Not at … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually … for nearly three years after her internship. “That level of commitment and collaboration between intern and mentor is …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … unique array of chemicals not typically found in oceans or soils.  A recent study published in  The ISME Journal     … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … has a number of applications, including pain relief. The microbes in cone snails may be involved in venom activity, … I have today. I didn’t know anything about Principal Component Analysis (PCAs) when I first started, and overall …
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
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Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and … award 0000238431 to D.H., the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation …
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