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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users … PhycoCosm’s built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows researchers to study how …
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Evaluation of inducible promoter–riboswitch constructs for heterologous protein expression in the cyanobacterial species Anabaena sp. PCC 7120
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VEGA Symposium
… Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place … campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” community to foster discussion on how to best …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … process called fermentation. To better understand the range of bacteria and archaea that rely on this form of … Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an interactive …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling … Cole led the work in collaboration with JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) … a DOE  Early Career Research Program (ECRP) award in 2021, which aims in part to build off of this work. Former …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, … of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s … of the diversity present in R570 but shows the genomic effects of breeding practices that transformed …
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Silver age of GOLD introduces new features
… matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated microbiome … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Data Collaborative ( NMDC ) and the DOE Systems Biology Knowledgebase ( KBase ) — and aims to extend these …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container … enzymes that can modify composition of algal lipids. This knowledge could be useful for controlling the lipid content … This research was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s Office of …
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