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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …
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iPHoP: A Matchmaker for Phages and their Hosts
… into the same workflow, then uses a machine-learning model to give its integrated prediction a confidence score. … different suggested matches. The machine learning model in the iPHoP program creates a way of evaluating these different routes. To train the model, the team used 1,870 known virus-host pairs to …
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DAP-seq Drives Robust Mapping of Gene Regulation
… that flip genetic switches — bind DNA were limited to a few model species and involved slow, labor-intensive … to map regulatory “switches” in species beyond traditional models. Updates to DAP-seq build upon the previous version … which of the transcription factors are responsible for shaping what a certain cell type looks like.” These recent …
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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment
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Toward More Efficient Artificial Photosynthesis
… was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of … compounds through a light-driven process. The JGI’s  CSP Functional Genomics call is open year-round, and reviews …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one …
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The Surprising Structure of a Shrub Willow Sex Chromosome
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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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JGI User Executive Committee Expands
… he’s interested in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback … functioning of ecosystems. She leads a recently approved CSP New Investigator proposal to understand the genetic … She is exploring the seagrass rhizosphere in her ongoing CSP New Investigator proposal. As an early career …
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Crysten Blaby-Haas
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JGI Announces 2025 New Investigator Portfolio
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