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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the overwhelming … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He … Your ethics always point due north.” Joe Harkins served as project lead on the new building that would eventually rise …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by … one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or … in some cases daily, check-ins with their mentors to ensure projects progressed despite the challenges of remote work. …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s … impact. Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in cross-disciplinary …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call … assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  …
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