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IMG/M: the integrated metagenome data management and comparative analysis system
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From Competition to Cooperation
… will assist researchers in moving toward functional genomics studies to learn more about the inner workings of … DE-AC02-05CH11231 within the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of … the Plant-Microbe Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and …
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Workforce Development & Education Outreach
… of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's …
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Igor Grigoriev
… protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … JGI MycoCosm portal. In 2018, he launched scale-up of algal genomics and PhycoCosm portal. Dr. Grigoriev engaged … of researchers in genome projects and organized numerous genomics workshops. … Igor Grigoriev is the Fungal & Algal …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… in Gold Sandra Hernandez Gonzalez and mentor Hualan Liu, Building Expression Host in Bacilli Class using CRAGE Technology Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving …
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New Lineages of Life Group
… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent …
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Virus ecology and 7‐year temporal dynamics across a permafrost thaw gradient
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Microbiome–metabolite linkages drive greenhouse gas dynamics over a permafrost thaw gradient
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Production of Fungal Mycelia in a Temperate Coniferous Forest Shows Distinct Seasonal Patterns
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Learning to Look
… to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are … and also those associated with humans.” The work also used resources of the  National Energy Research Scientific …
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Jinghua Jenny Huang
… on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and …
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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