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Exabiome: Advancing Microbial Science through Exascale Computing
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Diel partitioning in microbial phosphorus acquisition in the Sargasso Sea
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Quorum-driven microbial consortium for Bioplastic production from agro-waste
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Learning to Look
… by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … mined for this study. “We’re simply getting much better at seeing them, which means we can now study their …
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JGI@25: Roots of a Mutualist Relationship
… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … journal Nature . The mushroom has a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. …
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A Step Toward Controlling Soybean Rust
… yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to counter soybean rust disease. Soybean …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … sources and applies a standardized labeling scheme to better define the genomic information and ecosystems. These … are accessible on JGI data portals including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with … studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked to conditions such as …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … together over 400 proposal collaborators and co-authors with affiliations at over 180 organizations in 29 U.S. …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … diversity of microbes through a novel approach to better understand microbial communities by looking at … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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DRAM for distilling microbial metabolism to automate the curation of microbiome function
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Microbial Ecology on Solar Panels in Berkeley, CA, United States
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