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Waiting to Respire
… years ago, cyanobacteria acquired the ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and … of this field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic …
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Operating Expenses
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in the … so researchers around the world would have better, easier access to these viral genomes. The new database was called …
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Gene Expression: From On-Off Switch to Dial
… helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library approach to … which leverages an all-or-nothing approach to expression, scientists can now opt for various shades of grey. The … lead to sustainable pathways for making high-value bioproducts including biofuels. In addition, the team says that …
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Trent Northen
… in Metabolomics, The Scripps Research Institute Executive Education, UC Berkeley Haas School of Business DOE Oppenheimer … Brachypodium in EcoFAB 2.0 reveals that nitrogen form and starvation modulate root exudation. Science Advances, 2024 … serves as the Deputy Director of the Environmental Genomics and Systems Biology at Lawrence Berkeley National …
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Programs & Platform Leads
DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data Science & …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory … vector representations of proteins in order to conduct more efficient protein sequence alignments. He also aims … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Katherine Louie
… became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass spectrometry …
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A Plantiful Future: Xiaohan Yang
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JGI@25: Studying Sorghum’s Survival Skills
… support growing sorghum and other C4 plants for biofuel production, John Mullet (Texas A & M and Great Lakes Bioenergy … Drought Tolerance in Sorghum (EPICON) begins. Peggy Lemaux (UC Berkeley) and her team studied sorghum plants in drought … (2016-2018) in the field in Parlier, California at the UC Kearney Agricultural Research and Extension Center. 2017: …
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Learning to Look
July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint … developed an algorithm that a computer could use to conduct a similar type of search in microbial and metagenomic … be studying filamentous phages!” said Krupovic. “We can now start inquiring into their impact on microbial communities …
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