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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … they are found everywhere, comparatively little is known about viruses, much less those considered large and giant. …
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The Surprising Structure of a Shrub Willow Sex Chromosome
Sex in plants can be befuddling. Most species are hermaphrodites, expressing both male and female gametes in one … in mammals: a structure that helps correct deleterious mutations. The Impact Shrub willow and its close … by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to …
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Microbial Genomics & Metagenomics (MGM) Workshop
…   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes … wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic …
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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual …
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Learning to Look
Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal … cycling across the planet. Summary To understand more about how archaeal hosts and hitchhikers coexist, … Allen Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …
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The International Virus Bioinformatics Meeting 2020
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what it means in a … hills, and it has legacy mining that goes back more than 100 years. And in particular, there’s an inflow from the …
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When “The Blob” Made It Hotter Under the Water
… began in late 2013, when a large patch of warm ocean water about a third the size of the United States began forming in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … shared their findings in Communications Biology . They reported that the heatwave caused the microbial populations …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re … who have uncovered remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and materials. …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed …
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Evolution of a Fungal Gene Expression Regulator
… but is not well understood in fungi. A team of researchers reported on the largest analysis of 5mC distribution across … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …
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