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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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DOE Metrics
… = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on … data.   FY05-07 Sequencing Goals and Results Fiscal Year Sequence (GB) Operating Hours Targets Actual* Targets Actual …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Marine Microbe Contains Multitudes
… of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … ecotypes because, historically, they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA … bioinformatics tools designed for analysis of DNA and RNA sequence data.  …
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship
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The Architecture of Metabolism Maximizes Biosynthetic Diversity in the Largest Class of Fungi
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Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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Transposable Element Dynamics among Asymbiotic and Ectomycorrhizal Amanita Fungi
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Obligate biotrophy features unraveled by the genomic analysis of rust fungi
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Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses
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