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Multi‐season analysis reveals hundreds of drought‐responsive genes in sorghum
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture experiments showed …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public … evolutionary processes. The team then extended their analysis beyond the reference set, using two additional … systems for energy and other applications. All annotations, comparative tools, and visualizations are publicly available …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … also collaborated to advance computing infrastructure and analysis. This way, JGI users — both primary, … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … — including the eelgrass genome assembly that enabled analysis of the whole genome duplication event — …
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Comparative genomics of the genus Desulfitobacterium
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Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … facilities that we worked with are cutting edge in terms of analysis and the fascinating results that we managed to …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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