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A One-Stop Shop for Analyzing Algal Genomes
… genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … in the Nucleic Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… to the JGI’s forging new collaborations with the FICUS program, through which researchers can access multiple DOE … “While I never said this out loud,” Drell said, speaking to users and staff at the JGI’s 2022 User Meeting, "I think I … during his time as program manager, he rarely received calls that were critical of the JGI’s work. Those which he …
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Annotation of metagenome short reads using proxygenes
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
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Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Making a Lichen Together
… a lichen’s genomes and transcriptomes could help inform efforts at bioengineering symbiotic microbial … colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed …
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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