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Finding the Fermenters
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on …
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Simon Roux
… to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome …
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Gene Expression: From On-Off Switch to Dial
… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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JGI announces final round of 2022 Functional Genomics awardees
… functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, … “This exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal also reviewed and assigned …
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Effects of Polar Light Cycle on Microbial Food Web
… producers fueling our planet’s biogeochemical cycles. Water samples from Ace Lake were collected over a 10-year period … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Training the Next Generation of Talent
Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … project had him developing a framework that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American …
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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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You Can Move, But You Can’t Hide
… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory … Lab), with computing resources provided by NERSC, another user facility at Berkeley Lab. geNomad is now accessible … Office of Science and the National Nuclear Security Administration. The work conducted by the National Microbiome …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the cell. The team assembled 130 genomes from their sample — a small proportion of the sample’s billions of … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Doubling Down on Known Protein Families
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of these communities via whole genome sequencing of the samples, without being able to distinguish which gene … genes were typically discarded from any analysis as useless information. These represent the ‘unknown unknowns’ because …
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