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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… decades to develop new crops. One example is an ongoing collaborative effort to improve the emerging bioenergy crop … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has produced a … John Lovell, an evolutionary biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have …
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Gene Expression: From On-Off Switch to Dial
… to other systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Researchers …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute … students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … I hope to gain professional skills, advice skills, wet lab skills and overall connections. Theo Loureaux : I wanted …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, … the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon … thus bypassing the need to culture these microbes in the lab. After joining the JGI, he formed the Microscale …
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Tracking the Origins of Methane-Producing Microbes
… (MAGs) were recovered, most of them archaea. The Quake lab had previously collaborated with the JGI on a proposal … observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with genetic … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the … of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and Higher …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Science Programs
The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … develop cutting edge approaches for and with users, and create computational tools and resources for them. Their …
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A One-Stop Shop for Analyzing Algal Genomes
… the greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), have unveiled …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass … to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the call …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… publication in Molecular Biology and Evolution . “It’s my first publication and it feels so rewarding,” Wint said. For … after her internship. “That level of commitment and collaboration between intern and mentor is what we strive for,” … that help to explain their work and its impacts at Berkeley Lab and beyond. Last summer, Wint hosted a virtual …
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