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… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with a widening circle of researchers whose work aligns with DOE missions .  Below …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the … Roland Hatzenpichler is an associate professor at Montana University and associate director of its Thermal Biology …

… to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene expression allowed researchers to identify … was led by Hal Alper, professor and associate chair at the University of Texas, Austin, and included researchers at the …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. …

… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, reported on over the … Additionally, working with Michelle O’Malley’s team at the University of California, Santa Barbara, he and his …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … and other traits that make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled … from these gardens, a team led by researchers at the University of Texas at Austin produced a high-quality …

… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … (Andrew Tritt of CRD and, independently, Ying Zhang of the University of Rhode Island), and to bin metagenomic contigs …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … The origin of this relationship though, is often antagonistic and the parasite first needs to secure its own … a collaborative effort led by researchers at Cornell University and scientists at the Joint Genome Institute, a …

… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … Pacific Northwest National Laboratory, Northern Arizona University, Argonne National Laboratory and the JGI.  With … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host …

… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … Understanding these complex symbioses between organisms feeds into a better understanding of nutrient cycling across …

… Analysis of haloarchaeal metagenomes broadens understanding of … biogeography in the haloarchaeal gene pool, a team led by University of New South Wales (UNSW)-Sydney professor Rick … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional …