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Evolution of a Fungal Gene Expression Regulator
… The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but … than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … across 528 species. The researchers found that unlike most flowering plants and animals, fungi lack gene body …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Molecular Sciences Laboratory (EMSL) , successful applicants can also access resources at NEON. This includes … I need? A: Make a request through the NEON assignable assets program. Q: For a NEON Assignable Assets project, does … Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: Not at …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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Sequencing Technologies & Products
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, … category of data (key) for their files as a baseline, we can allow a user to collect all of the ‘protein FASTA files’ …
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The Expanding Universe of Methane Metabolisms in Archaea
… , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. … IMG because the database already contains metagenome datasets from a variety of environments, as well as tools for … of this metabolism to geochemical data, which in turn can help to understand its impact on climate along earth …
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Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T)
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Training the Next Generation of Talent
… Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole … whose research interests and experiences overlap significantly with the goals of the program could be considered.” … as it’s getting closer to producing trillion base data sets on daily basis.” As part of their learning experience, …
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Vision, challenges and opportunities for a Plant Cell Atlas
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Reference genome sequence of the model plant Setaria
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The Evolution of an Invasive Plant, Sorghum halepense L. (‘Johnsongrass’)
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