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… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein …

… Currently one of the best ways to study such viruses is by sequencing the bulk DNA or RNA contained in a sample that has been collected from any kind of environment you can think of – animal … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create … to offer researchers high-powered tools for large-scale assembly and analysis.   To put these efforts into … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the …

… single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … Microscale Applications group . Cells were randomly sorted, whole genome amplified, then sequenced and assembled. Robert …

… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or isolated strains, … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector …

… break down the components of plant cell walls, which range from simple to complex carbohydrates, and then convert them … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …

… Department of Energy’s goal of producing sustainable fuels from alternative sources. Moreover, the team says the … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … sgRNA sequences: six for every gene in the genome. The JGI  DNA Synthesis Science team synthesized these sgRNAs, cloning …