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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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JGI@25: Using Team Science to Build Communities Around Data
… has “significantly advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … crop plants have been manipulated over time by humans, they tend to have unusual genomes. “The OGG plants provide a true …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this conversation with Alison Narayan. … NARAYAN: And the planet was hotter millions and billions of years ago. DAN UDWARY: Like, really early on. [LAUGHING] …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Analysis of Brachypodium genomes with genome-wide optical maps
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Performance evaluation and tuning of BioPig for genomic analysis
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Comparative Genomics Analysis of Trichoderma reesei Strains
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in … a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … capable of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … of the physical memorabilia that she’s held onto over the years. The DOE brought together the people and resources … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after … begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By …
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