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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global … of $500 billion worldwide underscores its value and importance in the fabric of our lives. In the United States, … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of … JGI’s Integrated Microbial Genomes & Microbiomes ( IMG/M ) portal. As part of a comparative analysis, 824 new … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers
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Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides
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Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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Integrating Microbial Community Data Into an Ecosystem‐Scale Model to Predict Litter Decomposition in the Face of Climate Change
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has desirable properties as a liquid transportation fuel, it simply doesn’t yield enough gallons of …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … of interest in a complex environmental sample and then sorting these cells so that their DNA could be sequenced. …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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