Results

Biases in genome reconstruction from metagenomic data
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A metagenomic perspective on the microbial prokaryotic genome census
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Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria
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Extreme Scale De Novo Metagenome Assembly
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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Metagenomic Sequencing of Two Salton Sea Microbiomes
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New …
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Plant–microbiome interactions: from community assembly to plant health
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Genome-reconstruction for eukaryotes from complex natural microbial communities
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Biogeochemical Cycling by a Low-Diversity Microbial Community in Deep Groundwater
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … for helping identify active micro-organisms within complex communities, and custom software for integrating … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Tackling soil diversity with the assembly of large, complex metagenomes
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