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Supercharging SIP in the Fungal Hyphosphere
… The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … of DNA is time consuming, tedious and potentially error prone, which limits the size and complexity of … at a larger scale through downstream DNA purification and sequencing steps. Ultimately, researchers found their …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …
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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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BdCESA7, BdCESA8, and BdPMT Utility Promoter Constructs for Targeted Expression to Secondary Cell-Wall-Forming Cells of Grasses
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Reductive amination cascades in cell‐free and resting whole cell formats for valorization of lignin deconstruction products
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Populus PtrbHLH011 Is a Transcriptional Co‐Regulator Involved in the Activation of Cell Wall Biosynthesis by Iron Deprivation
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A nucleoside signal generated by a fungal endophyte regulates host cell death and promotes root colonization
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … all the energy they can. The results in the study were enabled by a number of  in vitro and  in vivo experiments, … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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