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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Dissolved Inorganic Carbon-Accumulating Complexes from Autotrophic Bacteria from Extreme Environments
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Marine Microbe Contains Multitudes
… But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … This research was supported by grants from the Simons Foundation (#329108 and #721223 to EFD) and …
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New voyages to explore the natural product galaxy
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The Dynamic Influence of Subsurface Geological Processes on the Assembly and Diversification of Thermophilic Microbial Communities in Continental Hydrothermal Systems
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Finding the Fermenters
… recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of … National Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an … ruminant guts, sediments, and anaerobic bioreactors. Aside from producing energy that the organisms can use to thrive, …
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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Metagenome-assembled genomes from microbial communities producing lactic acid from dairy residues
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JGI Early Career Researchers Featured in mSystems Special Issue
… 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation could … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on sequence reads to link …
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JGI Hosts GPU Hackathon in May
… May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing … and the code owners will be able to get assistance from mentors and a team to port their code to a new … From our partners …
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