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… energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop … large-scale “citizen science” project to generate real-time data for modeling and predicting the spread of a plant …

… ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … and that’s going really well. And having the sequence data available for us to enable that research will have a …

… fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst …

… Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples …

… sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA stable … address some of the most pressing challenges of our time. For more information, please visit  …

… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … Lead Dan Rokhsar , Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

… For many scientists, the culmination of their work into a … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …

… by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … vegetation types in the world combined. Harvesting peat for energy has been increasingly discouraged due to … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team …

… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …

… Before 2006, Olpidium was one of the many obscure fungi of … of their well-designed sampling and analysis of their data at the time. Following the publication of their paper … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …

… FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call … from the JGI and EMSL in one proposed research project. In the same proposal, researchers can also request … Neutron Scattering (BioSANS) instrument at the Center for Structural Molecular Biology (CSMB) at Oak Ridge …

… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out …