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… probing (DNA SIP) relies on incubating DNA with isotopically-labeled compounds to link active microbes with … of Eloe-Fadrosh’s Environmental Genomics group, makes a pitch for readers to get involved in the developing field of virus ecogenomics. While microbes regulate the …

… group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of … also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of … al 2022 . HT-SIP: a semi-automated stable isotope probing pipeline identifies cross-kingdom interactions in the …

DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be … natural products. So, it’s a departure from the previous episodes where Alison [Takemura] and I chatted about science. This episode is our conversation with Nancy Keller, a fantastic …

… and development of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. … probing (SIP) to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex …

… extracting links between the genetic variation and phenotypic performance,” he said. Both switchgrass and poplar are JGI Flagship Plants. Reaping Long-Term Investment Benefits Switchgrass has a large … found as multiple copies across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in …

Dr. Schulz established a single-cell-based discovery pipeline and enrichment metagenomics for terrestrial …

… year-over-year on marginal soil and with few resources. Despite the low maintenance, it can produce an impressive … genome, which means most genes are found as multiple copies across the chromosomes. In a follow-up study , … types of naturally occurring switchgrass, those with 4 copies of the genome (4X) and those with eight copies (8X). …

… and his colleagues had identified 1,110 genes involved in lipid metabolism.  “There’s still a lot of thinking that truck … the grower is novel … We’re a long way there; we are developing traits with key partners, both Corteva and Bayer, and …

… crops more efficiently in the future, the evolutionary past may hold key insights. The way that plants process … specialized metabolism, organisms tend to evolve multiple copies of enzymes, similar to including half a dozen slightly … have maintained functional versatility with fewer enzyme copies. In this way, this family is more like including a …