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IMG/M: a data management and analysis system for metagenomes
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A synthesis of bacterial and archaeal phenotypic trait data
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Biases in genome reconstruction from metagenomic data
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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Toward a Data Infrastructure for the Plant Cell Atlas.
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AmiGO: online access to ontology and annotation data
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Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi have genes that can break … proteins in the samples were then isolated and sequenced by scientists at the Environmental Molecular Sciences …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … or together, on nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass spectrometry …
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Green Algae Reveal One mRNA Encodes Many Proteins
… reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples … zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like … and first author of the article. The research team included scientists at the University of California (UC), Berkeley, …
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