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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … ecosystems (EcoFABs). … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about … (16), 567–571 (2019) doi: 10.1038/s41592-019-0465-0. Couradeau E et al. Probing the active fraction of soil …
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Genome organization and botanical diversity
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant …
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Chapter Seven Phylogenetics and Phylogenomics of Rust Fungi
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Training the Next Generation of Talent
… of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more … sectors and it is still seen today as a massive feat in science and collaboration. In closing his presentation, … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI Launches Latest Strategic Plan
… has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … and incubation process. “JGI’s ‘vision’ is truly a tour de force,” said Mary Maxon, Biosciences Associate …
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Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor
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A Collaboration to Improve Plant Genome Annotations Across Species
JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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